Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | LACAL_RS12930 | Not Available | Negative | 2871263 - 2871874 | 22085.9 |
| duf3124 domain-containing protein | LACAL_RS12935 | Not Available | Negative | 2871875 - 2872384 | 19207.0 |
| badf/badg/bcra/bcrd atpase family protein | LACAL_RS12940 | Not Available | Negative | 2872483 - 2873346 | 32885.8 |
| type i glyceraldehyde-3-phosphate dehydrogenase | LACAL_RS12945 | Not Available | Negative | 2873449 - 2874450 | 35996.9 |
| 6-phosphofructokinase | LACAL_RS12950 | Not Available | Negative | 2874473 - 2875459 | 35499.7 |
| translocation/assembly module tamb domain-containing protein | LACAL_RS12955 | Not Available | Negative | 2875640 - 2880013 | 164153.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | LACAL_RS12960 | Not Available | Positive | 2880162 - 2881184 | 37058.8 |
| hypothetical protein | LACAL_RS12965 | Not Available | Positive | 2881237 - 2881851 | 24417.8 |
| peptidylprolyl isomerase | LACAL_RS12970 | Not Available | Positive | 2881966 - 2882601 | 24687.0 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | LACAL_RS12975 | Not Available | Positive | 2882601 - 2883305 | 26448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
