Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ph domain-containing protein | LACAL_RS12880 | Not Available | Negative | 2860907 - 2861422 | 19503.1 |
| hypothetical protein | LACAL_RS12885 | Not Available | Negative | 2861427 - 2861621 | 7636.44 |
| (fe-s)-binding protein | LACAL_RS12890 | Not Available | Negative | 2861642 - 2862433 | 29182.1 |
| hypothetical protein | LACAL_RS12895 | Not Available | Negative | 2862455 - 2862793 | 13254.3 |
| (fe-s)-binding protein | LACAL_RS12900 | Not Available | Negative | 2862786 - 2864099 | 49489.6 |
| mlad family protein | LACAL_RS12905 | Not Available | Negative | 2864114 - 2865052 | 34331.6 |
| n-acetylmuramoyl-l-alanine amidase family protein | LACAL_RS12910 | Not Available | Negative | 2865109 - 2866296 | 44674.6 |
| putative lps assembly protein lptd | LACAL_RS12915 | Not Available | Positive | 2866314 - 2869088 | 105355.0 |
| rida family protein | LACAL_RS12920 | Not Available | Positive | 2869132 - 2869512 | 13858.7 |
| phytoene desaturase family protein | LACAL_RS12925 | Not Available | Negative | 2869526 - 2871214 | 62878.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
