Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LACAL_RS01265 | Not Available | Positive | 278921 - 280420 | 57031.1 |
| two-component system response regulator | LACAL_RS01270 | Not Available | Positive | 280413 - 280814 | 15247.5 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | LACAL_RS01275 | Not Available | Negative | 280811 - 281191 | 14871.7 |
| m20/m25/m40 family metallo-hydrolase | LACAL_RS01280 | Not Available | Negative | 281195 - 282592 | 51626.4 |
| ppk2 family polyphosphate kinase | LACAL_RS01285 | Not Available | Negative | 282695 - 283573 | 34320.2 |
| sigma-54-dependent transcriptional regulator | LACAL_RS01290 | Not Available | Negative | 283733 - 284896 | 43119.5 |
| duf6268 family outer membrane beta-barrel protein | LACAL_RS01295 | Not Available | Negative | 284896 - 285783 | 34077.9 |
| mechanosensitive ion channel family protein | LACAL_RS01300 | Not Available | Negative | 285787 - 286746 | 36210.0 |
| abc transporter permease | LACAL_RS01305 | Not Available | Negative | 286748 - 288061 | 49181.0 |
| abc transporter atp-binding protein | LACAL_RS01310 | Not Available | Negative | 288067 - 288993 | 34726.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
