Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | LACAL_RS12730 | Not Available | Positive | 2827048 - 2827902 | 32431.7 |
| hypothetical protein | LACAL_RS12735 | Not Available | Positive | 2827954 - 2828550 | 21926.6 |
| uracil-dna glycosylase | LACAL_RS12740 | Not Available | Negative | 2828547 - 2829215 | 25582.4 |
| yfcc family protein | LACAL_RS12745 | Not Available | Positive | 2829279 - 2830772 | 53834.4 |
| fad-dependent monooxygenase | LACAL_RS12750 | Not Available | Positive | 2830793 - 2831917 | 41713.3 |
| sdr family oxidoreductase | LACAL_RS12755 | Not Available | Positive | 2831938 - 2832747 | 30200.4 |
| endonuclease muts2 | LACAL_RS12760 | Not Available | Positive | 2832877 - 2835045 | 82868.3 |
| thiol-disulfide oxidoreductase dcc family protein | LACAL_RS12765 | Not Available | Positive | 2835045 - 2835485 | 16800.8 |
| hypothetical protein | LACAL_RS12770 | Not Available | Negative | 2835553 - 2835807 | 9409.47 |
| aspartate/glutamate racemase family protein | LACAL_RS12775 | Not Available | Negative | 2836045 - 2836701 | 24931.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
