Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | LACAL_RS12685 | Not Available | Positive | 2816895 - 2818241 | 50923.2 |
| tolc family protein | LACAL_RS12690 | Not Available | Positive | 2818243 - 2819628 | 52885.7 |
| cold-shock protein | LACAL_RS12695 | Not Available | Negative | 2819683 - 2820135 | 17196.6 |
| hypothetical protein | LACAL_RS15085 | Not Available | Negative | 2820233 - 2820949 | 26942.9 |
| hypothetical protein | LACAL_RS15605 | Not Available | Positive | 2821453 - 2821587 | 5172.28 |
| thiamine pyrophosphate-dependent enzyme | LACAL_RS12705 | Not Available | Negative | 2821659 - 2823647 | 74052.8 |
| isopenicillin n synthase family dioxygenase | LACAL_RS12710 | Not Available | Positive | 2823792 - 2824739 | 36077.9 |
| translation initiation factor | LACAL_RS12715 | Not Available | Positive | 2824810 - 2825136 | 12372.9 |
| duf1835 domain-containing protein | LACAL_RS12720 | Not Available | Positive | 2825141 - 2826082 | 36739.2 |
| nucleoside phosphorylase | LACAL_RS12725 | Not Available | Positive | 2826072 - 2826941 | 31986.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
