Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | LACAL_RS12635 | Not Available | Positive | 2804847 - 2805149 | 11470.4 |
| class i sam-dependent rrna methyltransferase | LACAL_RS12640 | Not Available | Negative | 2805219 - 2806451 | 45409.5 |
| dead/deah box helicase | LACAL_RS12645 | Not Available | Negative | 2806456 - 2807577 | 41908.2 |
| dead/deah box helicase | LACAL_RS12650 | Not Available | Negative | 2807712 - 2809265 | 59730.1 |
| duf1853 family protein | LACAL_RS12655 | Not Available | Positive | 2809368 - 2810183 | 31901.8 |
| type ia dna topoisomerase | LACAL_RS12660 | Not Available | Positive | 2810274 - 2812571 | 86926.1 |
| pseudouridine synthase | LACAL_RS12665 | Not Available | Positive | 2812572 - 2813147 | 21299.9 |
| mechanosensitive ion channel family protein | LACAL_RS12670 | Not Available | Positive | 2813219 - 2814466 | 47679.4 |
| tetr/acrr family transcriptional regulator | LACAL_RS12675 | Not Available | Positive | 2814552 - 2815229 | 26271.8 |
| peptidase domain-containing abc transporter | LACAL_RS12680 | Not Available | Positive | 2815229 - 2816893 | 62325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
