Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | LACAL_RS12590 | Not Available | Positive | 2792009 - 2792632 | 24477.8 |
| duf962 domain-containing protein | LACAL_RS12595 | Not Available | Positive | 2792645 - 2793130 | 18187.2 |
| transcriptional regulator | LACAL_RS12600 | Not Available | Positive | 2793304 - 2794938 | 63999.4 |
| hypothetical protein | LACAL_RS12605 | Not Available | Positive | 2795122 - 2795613 | 18367.4 |
| llm class flavin-dependent oxidoreductase | LACAL_RS12610 | Not Available | Positive | 2795799 - 2796812 | 37210.4 |
| hypothetical protein | LACAL_RS15475 | Not Available | Positive | 2797235 - 2797372 | 5220.44 |
| p-loop ntpase fold protein | LACAL_RS12615 | Not Available | Positive | 2797565 - 2800903 | 130164.0 |
| crp/fnr family transcriptional regulator | LACAL_RS12620 | Not Available | Negative | 2801782 - 2802471 | 25409.9 |
| hypothetical protein | LACAL_RS12625 | Not Available | Negative | 2802560 - 2802847 | 10252.0 |
| hypothetical protein | LACAL_RS12630 | Not Available | Negative | 2802936 - 2804687 | 66980.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
