Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | LACAL_RS01215 | Not Available | Positive | 262390 - 264228 | 68461.7 |
| t9ss type b sorting domain-containing protein | LACAL_RS01220 | Not Available | Positive | 264344 - 269164 | 176747.0 |
| choice-of-anchor l domain-containing protein | LACAL_RS01225 | Not Available | Positive | 269238 - 271577 | 86005.9 |
| excinuclease abc subunit uvrb | LACAL_RS01230 | Not Available | Positive | 271677 - 273680 | 76586.4 |
| srpbcc family protein | LACAL_RS01235 | Not Available | Positive | 273683 - 274117 | 16742.4 |
| hypothetical protein | LACAL_RS01240 | Not Available | Negative | 274125 - 274538 | 16163.8 |
| duf1456 family protein | LACAL_RS01245 | Not Available | Positive | 275018 - 275341 | 12740.5 |
| adp-forming succinate--coa ligase subunit beta | LACAL_RS01250 | Not Available | Negative | 275373 - 276566 | 42689.1 |
| hypothetical protein | LACAL_RS01255 | Not Available | Negative | 276759 - 277415 | 24745.1 |
| diaminopimelate decarboxylase | LACAL_RS01260 | Not Available | Positive | 277528 - 278754 | 45878.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
