Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dps family protein | LACAL_RS12240 | Not Available | Positive | 2711507 - 2712010 | 19396.2 |
| mechanosensitive ion channel family protein | LACAL_RS12245 | Not Available | Positive | 2712061 - 2712966 | 33340.7 |
| duf1328 family protein | LACAL_RS15220 | Not Available | Positive | 2713011 - 2713166 | 5482.23 |
| hypothetical protein | LACAL_RS15470 | Not Available | Positive | 2713280 - 2713420 | 5116.05 |
| duf2461 domain-containing protein | LACAL_RS12255 | Not Available | Positive | 2713514 - 2714188 | 26544.6 |
| hypothetical protein | LACAL_RS12260 | Not Available | Negative | 2714204 - 2714620 | 16279.9 |
| duf72 domain-containing protein | LACAL_RS12265 | Not Available | Positive | 2714733 - 2715632 | 35424.9 |
| acyl-coa thioesterase | LACAL_RS12270 | Not Available | Positive | 2715636 - 2716022 | 14645.0 |
| duf3817 domain-containing protein | LACAL_RS12275 | Not Available | Negative | 2716045 - 2716326 | 10508.4 |
| m16 family metallopeptidase | LACAL_RS12280 | Not Available | Positive | 2716429 - 2719260 | 105324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
