Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | LACAL_RS12190 | Not Available | Positive | 2703253 - 2704392 | 43098.5 |
| imidazole glycerol phosphate synthase subunit hish | LACAL_RS12195 | Not Available | Positive | 2704392 - 2704973 | 21369.9 |
| duf3592 domain-containing protein | LACAL_RS12200 | Not Available | Positive | 2704994 - 2705440 | 16685.7 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | LACAL_RS12205 | Not Available | Positive | 2705554 - 2706297 | 27232.8 |
| imidazole glycerol phosphate synthase subunit hisf | LACAL_RS12210 | Not Available | Positive | 2706376 - 2707131 | 26810.4 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | LACAL_RS12215 | Not Available | Positive | 2707252 - 2707854 | 22370.6 |
| s41 family peptidase | LACAL_RS12220 | Not Available | Negative | 2707901 - 2709100 | 46610.9 |
| lyttr family dna-binding domain-containing protein | LACAL_RS12225 | Not Available | Negative | 2709196 - 2709993 | 31050.5 |
| hypothetical protein | LACAL_RS12230 | Not Available | Negative | 2710061 - 2710477 | 15368.5 |
| trna pseudouridine synthase a | LACAL_RS12235 | Not Available | Positive | 2710575 - 2711351 | 29933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
