Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS12045 | Not Available | Negative | 2674170 - 2674556 | 15013.2 |
| helix-turn-helix domain-containing protein | LACAL_RS12050 | Not Available | Negative | 2674662 - 2675078 | 15868.9 |
| m14 family zinc carboxypeptidase | LACAL_RS12055 | Not Available | Positive | 2675391 - 2676536 | 42970.7 |
| lrp/asnc family transcriptional regulator | LACAL_RS12060 | Not Available | Positive | 2676602 - 2677081 | 18232.3 |
| dinb family protein | LACAL_RS12065 | Not Available | Positive | 2677155 - 2677670 | 19932.9 |
| hypothetical protein | LACAL_RS12070 | Not Available | Negative | 2677678 - 2677968 | 11036.9 |
| 3-dehydroquinate synthase | LACAL_RS12075 | Not Available | Negative | 2678054 - 2679121 | 39776.8 |
| proline dehydrogenase family protein | LACAL_RS12080 | Not Available | Positive | 2679213 - 2680385 | 45341.4 |
| duf4258 domain-containing protein | LACAL_RS12085 | Not Available | Negative | 2680382 - 2680762 | 14448.6 |
| alanine dehydrogenase | LACAL_RS12090 | Not Available | Negative | 2680862 - 2682061 | 43559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
