Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-2-hydroxyacid dehydrogenase | LACAL_RS11995 | Not Available | Negative | 2661371 - 2662333 | 34533.7 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | LACAL_RS12000 | Not Available | Negative | 2662406 - 2663467 | 39242.4 |
| acyl-coa reductase | LACAL_RS12005 | Not Available | Negative | 2663580 - 2664638 | 40804.4 |
| 4fe-4s dicluster domain-containing protein | LACAL_RS12010 | Not Available | Positive | 2664712 - 2665065 | 12865.9 |
| carboxypeptidase-like regulatory domain-containing protein | LACAL_RS12015 | Not Available | Negative | 2665143 - 2666258 | 41625.5 |
| redox-regulated atpase ychf | LACAL_RS12020 | Not Available | Positive | 2666467 - 2667561 | 39843.6 |
| phosphatase pap2 family protein | LACAL_RS12025 | Not Available | Negative | 2667637 - 2668461 | 30452.9 |
| dna topoisomerase iv subunit b | LACAL_RS12030 | Not Available | Positive | 2668691 - 2670550 | 70568.1 |
| dna gyrase/topoisomerase iv subunit a | LACAL_RS12035 | Not Available | Positive | 2670626 - 2673349 | 103604.0 |
| terc family protein | LACAL_RS12040 | Not Available | Negative | 2673365 - 2674159 | 29592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
