Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | LACAL_RS11900 | Not Available | Positive | 2643379 - 2643963 | 22843.7 |
| hypothetical protein | LACAL_RS15460 | Not Available | Positive | 2644022 - 2644165 | 5445.6 |
| endonuclease iii domain-containing protein | LACAL_RS11905 | Not Available | Negative | 2644218 - 2644874 | 24819.3 |
| thioredoxin-dependent thiol peroxidase | LACAL_RS11910 | Not Available | Positive | 2644921 - 2645376 | 16961.1 |
| yebc/pmpr family dna-binding transcriptional regulator | LACAL_RS11915 | Not Available | Negative | 2645451 - 2646173 | 26929.7 |
| hypothetical protein | LACAL_RS11920 | Not Available | Negative | 2646286 - 2647320 | 39796.8 |
| carboxy terminal-processing peptidase | LACAL_RS11925 | Not Available | Negative | 2647324 - 2649384 | 78150.8 |
| 4a-hydroxytetrahydrobiopterin dehydratase | LACAL_RS11930 | Not Available | Negative | 2649453 - 2649743 | 11100.0 |
| sugar nucleotide-binding protein | LACAL_RS11935 | Not Available | Negative | 2649789 - 2650622 | 32203.0 |
| glutaminase | LACAL_RS11940 | Not Available | Negative | 2650638 - 2651552 | 33897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
