Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formimidoylglutamase | LACAL_RS11755 | Not Available | Negative | 2607021 - 2608043 | 38160.9 |
| hypothetical protein | LACAL_RS11760 | Not Available | Positive | 2608138 - 2609022 | 32700.9 |
| imidazolonepropionase | LACAL_RS11765 | Not Available | Negative | 2609113 - 2610348 | 45346.6 |
| hypothetical protein | LACAL_RS11770 | Not Available | Negative | 2610352 - 2610636 | 10873.7 |
| crp/fnr family transcriptional regulator | LACAL_RS11775 | Not Available | Positive | 2610812 - 2611411 | 23176.1 |
| class ii fumarate hydratase | LACAL_RS11780 | Not Available | Negative | 2611547 - 2612944 | 50199.2 |
| hypothetical protein | LACAL_RS11785 | Not Available | Positive | 2613015 - 2613884 | 33860.1 |
| lipid a deacylase lpxr family protein | LACAL_RS11790 | Not Available | Negative | 2613874 - 2614836 | 36254.4 |
| hypothetical protein | LACAL_RS15320 | Not Available | Positive | 2614979 - 2615185 | 8079.11 |
| outer membrane beta-barrel family protein | LACAL_RS11795 | Not Available | Negative | 2615272 - 2617722 | 92037.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
