Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS11510 | Not Available | Positive | 2559785 - 2560504 | 28426.4 |
| hypothetical protein | LACAL_RS11515 | Not Available | Positive | 2560594 - 2561100 | 18397.8 |
| hypothetical protein | LACAL_RS11520 | Not Available | Positive | 2561107 - 2561829 | 28977.2 |
| hypothetical protein | LACAL_RS11525 | Not Available | Positive | 2561834 - 2562562 | 29068.4 |
| sensor histidine kinase | LACAL_RS11530 | Not Available | Positive | 2562694 - 2563524 | 31303.2 |
| aldehyde dehydrogenase | LACAL_RS11535 | Not Available | Negative | 2563526 - 2564896 | 50999.0 |
| rlua family pseudouridine synthase | LACAL_RS11540 | Not Available | Negative | 2564956 - 2565666 | 26880.7 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | LACAL_RS11545 | Not Available | Negative | 2565696 - 2566514 | 29978.5 |
| hypothetical protein | LACAL_RS11550 | Not Available | Positive | 2566621 - 2567091 | 18186.7 |
| l-serine ammonia-lyase | LACAL_RS11555 | Not Available | Negative | 2567165 - 2568589 | 52289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
