Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase family protein | LACAL_RS11460 | Not Available | Negative | 2548731 - 2549324 | 21970.7 |
| endonuclease/exonuclease/phosphatase family protein | LACAL_RS11465 | Not Available | Negative | 2549627 - 2550343 | 28504.7 |
| duf2075 domain-containing protein | LACAL_RS11470 | Not Available | Negative | 2550355 - 2552043 | 65144.6 |
| nucleotide pyrophosphohydrolase | LACAL_RS11475 | Not Available | Negative | 2552046 - 2552375 | 12843.3 |
| tetratricopeptide repeat protein | LACAL_RS15215 | Not Available | Negative | 2552379 - 2554340 | 76091.7 |
| sos response-associated peptidase | LACAL_RS11485 | Not Available | Positive | 2554547 - 2555275 | 28347.5 |
| atp-binding protein | LACAL_RS11490 | Not Available | Positive | 2555792 - 2557261 | 56884.2 |
| hypothetical protein | LACAL_RS11495 | Not Available | Positive | 2557795 - 2558619 | 31135.9 |
| transposase | LACAL_RS11500 | Not Available | Positive | 2558592 - 2559347 | 28328.8 |
| hypothetical protein | LACAL_RS11505 | Not Available | Positive | 2559425 - 2559778 | 12927.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
