Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | LACAL_RS15080 | Not Available | Negative | 2537845 - 2538867 | 39386.6 |
| gpw/gp25 family protein | LACAL_RS11420 | Not Available | Positive | 2539072 - 2539506 | 17020.4 |
| type vi secretion system baseplate subunit tssf | LACAL_RS11425 | Not Available | Positive | 2539515 - 2541344 | 69463.1 |
| pkd domain-containing protein | LACAL_RS11430 | Not Available | Positive | 2541387 - 2542382 | 37767.3 |
| hypothetical protein | LACAL_RS11435 | Not Available | Positive | 2542389 - 2543543 | 44145.3 |
| type vi secretion system transmembrane protein tsso | LACAL_RS11440 | Not Available | Positive | 2543561 - 2544064 | 19529.5 |
| transposase | LACAL_RS11445 | Not Available | Positive | 2544176 - 2545021 | 30367.9 |
| recombinase family protein | LACAL_RS11450 | Not Available | Positive | 2545078 - 2546835 | 68344.5 |
| hypothetical protein | LACAL_RS15410 | Not Available | Positive | 2546927 - 2547094 | 6548.37 |
| bt4734/bf3469 family protein | LACAL_RS11455 | Not Available | Positive | 2547404 - 2548744 | 51395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
