Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction resolvase ruvx | LACAL_RS01115 | Not Available | Negative | 236869 - 237279 | 15289.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | LACAL_RS01120 | Not Available | Positive | 237459 - 238274 | 29431.5 |
| glycosyltransferase family 9 protein | LACAL_RS01125 | Not Available | Positive | 238349 - 239410 | 40757.6 |
| glycosyltransferase family 2 protein | LACAL_RS01130 | Not Available | Negative | 239405 - 240229 | 31411.6 |
| glycosyltransferase family 2 protein | LACAL_RS01135 | Not Available | Positive | 240290 - 241045 | 29147.0 |
| lipopolysaccharide kinase inaa family protein | LACAL_RS01140 | Not Available | Negative | 241042 - 241806 | 30298.2 |
| glycosyltransferase family 2 protein | LACAL_RS01145 | Not Available | Negative | 241799 - 242593 | 30546.6 |
| hypothetical protein | LACAL_RS01150 | Not Available | Negative | 242600 - 243472 | 34626.6 |
| hypothetical protein | LACAL_RS01155 | Not Available | Positive | 243589 - 244539 | 37120.7 |
| glycosyltransferase | LACAL_RS01160 | Not Available | Negative | 244541 - 245767 | 47658.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
