Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS15600 | Not Available | Negative | 2515954 - 2516076 | 4688.52 |
| hypothetical protein | LACAL_RS11315 | Not Available | Negative | 2516320 - 2516733 | 16226.4 |
| duf6531 domain-containing protein | LACAL_RS11320 | Not Available | Negative | 2516740 - 2521227 | 167556.0 |
| immunity 17 family protein | LACAL_RS11330 | Not Available | Negative | 2521521 - 2521784 | 9959.36 |
| hypothetical protein | LACAL_RS11335 | Not Available | Negative | 2521786 - 2523129 | 51160.5 |
| type vi secretion system vgr family protein | LACAL_RS11340 | Not Available | Negative | 2523131 - 2524897 | 63874.9 |
| type vi secretion system tube protein tssd | LACAL_RS11345 | Not Available | Negative | 2524918 - 2525316 | 14808.4 |
| type vi secretion system tube protein tssd | LACAL_RS11350 | Not Available | Negative | 2525420 - 2525806 | 14508.0 |
| tssn family type vi secretion system protein | LACAL_RS11355 | Not Available | Negative | 2525959 - 2526834 | 33817.6 |
| hypothetical protein | LACAL_RS11360 | Not Available | Negative | 2527317 - 2527802 | 18793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
