Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | LACAL_RS11115 | Not Available | Negative | 2474131 - 2475126 | 38117.2 |
| hypothetical protein | LACAL_RS11120 | Not Available | Negative | 2475329 - 2476249 | 36394.4 |
| sensor histidine kinase | LACAL_RS15070 | Not Available | Positive | 2476505 - 2478568 | 79064.5 |
| response regulator transcription factor | LACAL_RS11130 | Not Available | Positive | 2478573 - 2479214 | 24485.9 |
| hypothetical protein | LACAL_RS11135 | Not Available | Positive | 2479517 - 2479936 | 15338.5 |
| simpl domain-containing protein | LACAL_RS11140 | Not Available | Positive | 2479968 - 2480585 | 22987.6 |
| sdr family oxidoreductase | LACAL_RS11145 | Not Available | Negative | 2480653 - 2481513 | 31516.6 |
| tetr/acrr family transcriptional regulator | LACAL_RS11150 | Not Available | Negative | 2481566 - 2482117 | 20830.1 |
| lysr substrate-binding domain-containing protein | LACAL_RS11160 | Not Available | Negative | 2482593 - 2483459 | 33368.2 |
| lyse family translocator | LACAL_RS11165 | Not Available | Positive | 2483567 - 2484193 | 22978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
