Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | LACAL_RS10965 | Not Available | Positive | 2444314 - 2444766 | 16821.0 |
| hypothetical protein | LACAL_RS10970 | Not Available | Negative | 2444830 - 2445201 | 14694.8 |
| trans-sulfuration enzyme family protein | LACAL_RS10975 | Not Available | Positive | 2445331 - 2446479 | 42449.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | LACAL_RS10980 | Not Available | Positive | 2446483 - 2447376 | 33814.6 |
| bacillithiol biosynthesis deacetylase bshb1 | LACAL_RS10985 | Not Available | Positive | 2447403 - 2448119 | 26752.8 |
| Trna-his | Not Available | Not Available | Positive | 2448219 - 2448294 | Not Available |
| m28 family metallopeptidase | LACAL_RS10995 | Not Available | Negative | 2448426 - 2449982 | 58042.8 |
| m28 family peptidase | LACAL_RS11000 | Not Available | Negative | 2450059 - 2451081 | 38914.0 |
| hypothetical protein | LACAL_RS11005 | Not Available | Negative | 2451138 - 2451467 | 12147.9 |
| duf3108 domain-containing protein | LACAL_RS11010 | Not Available | Negative | 2451474 - 2452250 | 29243.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
