Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf493 family protein | LACAL_RS10820 | Not Available | Positive | 2415157 - 2415450 | 11140.5 |
| duf4290 domain-containing protein | LACAL_RS10825 | Not Available | Positive | 2415549 - 2416196 | 25359.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | LACAL_RS10830 | Not Available | Positive | 2416205 - 2417518 | 47932.4 |
| nuclear transport factor 2 family protein | LACAL_RS10835 | Not Available | Negative | 2417572 - 2417934 | 13650.0 |
| cryptochrome/photolyase family protein | LACAL_RS10840 | Not Available | Negative | 2418004 - 2419308 | 51581.3 |
| srpbcc family protein | LACAL_RS10845 | Not Available | Negative | 2419312 - 2419773 | 17829.8 |
| sdr family nad(p)-dependent oxidoreductase | LACAL_RS10850 | Not Available | Negative | 2419813 - 2420496 | 24544.1 |
| tigr03643 family protein | LACAL_RS10855 | Not Available | Negative | 2420535 - 2420834 | 11955.5 |
| hypothetical protein | LACAL_RS10860 | Not Available | Negative | 2420809 - 2421234 | 16519.3 |
| cryptochrome/photolyase family protein | LACAL_RS10865 | Not Available | Negative | 2421339 - 2422871 | 60631.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
