Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS10730 | Not Available | Positive | 2400796 - 2401059 | 10520.9 |
| hypothetical protein | LACAL_RS10735 | Not Available | Positive | 2401187 - 2401477 | 11606.9 |
| pd-(d/e)xk nuclease family protein | LACAL_RS10740 | Not Available | Positive | 2401551 - 2402510 | 37295.1 |
| hypothetical protein | LACAL_RS10745 | Not Available | Positive | 2402527 - 2403132 | 23555.8 |
| helix-turn-helix transcriptional regulator | LACAL_RS10750 | Not Available | Positive | 2403142 - 2404041 | 35046.8 |
| lytr/algr family response regulator transcription factor | LACAL_RS10755 | Not Available | Negative | 2404092 - 2404847 | 29024.6 |
| hypothetical protein | LACAL_RS10760 | Not Available | Negative | 2404848 - 2405897 | 41428.6 |
| hypothetical protein | LACAL_RS15450 | Not Available | Positive | 2406073 - 2406213 | 5091.99 |
| viperin family antiviral radical sam protein | LACAL_RS15065 | Not Available | Positive | 2406278 - 2407693 | 53929.7 |
| hypothetical protein | LACAL_RS10770 | Not Available | Positive | 2407702 - 2407995 | 11689.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
