Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | LACAL_RS10335 | Not Available | Positive | 2297947 - 2298285 | 13453.3 |
| 30s ribosomal protein s18 | LACAL_RS10340 | Not Available | Positive | 2298288 - 2298584 | 11346.0 |
| 50s ribosomal protein l9 | LACAL_RS10345 | Not Available | Positive | 2298598 - 2299059 | 16700.1 |
| carboxypeptidase regulatory-like domain-containing protein | LACAL_RS10350 | Not Available | Positive | 2299209 - 2302385 | 117121.0 |
| glycerophosphodiester phosphodiesterase family protein | LACAL_RS10355 | Not Available | Positive | 2302508 - 2303404 | 33954.7 |
| duf6495 family protein | LACAL_RS10360 | Not Available | Positive | 2303462 - 2303929 | 18362.7 |
| histidine--trna ligase | LACAL_RS10365 | Not Available | Positive | 2304152 - 2305534 | 51527.7 |
| t9ss type a sorting domain-containing protein | LACAL_RS15050 | Not Available | Negative | 2305607 - 2306572 | 36521.1 |
| lamg-like jellyroll fold domain-containing protein | LACAL_RS10375 | Not Available | Negative | 2306804 - 2312152 | 194572.0 |
| lamg-like jellyroll fold domain-containing protein | LACAL_RS10380 | Not Available | Negative | 2312407 - 2317050 | 171514.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
