Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein tssd | LACAL_RS10290 | Not Available | Negative | 2289687 - 2290382 | 26611.2 |
| non-canonical purine ntp diphosphatase | LACAL_RS10295 | Not Available | Negative | 2290467 - 2291042 | 21287.6 |
| hypothetical protein | LACAL_RS10300 | Not Available | Positive | 2291100 - 2291297 | 7388.49 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | LACAL_RS10305 | Not Available | Negative | 2291303 - 2291776 | 18063.1 |
| carboxylating nicotinate-nucleotide diphosphorylase | LACAL_RS10310 | Not Available | Positive | 2291858 - 2292718 | 31444.8 |
| yihy/virulence factor brkb family protein | LACAL_RS10315 | Not Available | Positive | 2292732 - 2293730 | 37787.5 |
| duf2147 domain-containing protein | LACAL_RS10320 | Not Available | Positive | 2293723 - 2294145 | 16357.9 |
| primosomal protein n' | LACAL_RS10325 | Not Available | Positive | 2294196 - 2296649 | 94053.6 |
| hypothetical protein | LACAL_RS15405 | Not Available | Positive | 2296761 - 2296934 | 6433.45 |
| lytr/algr family response regulator transcription factor | LACAL_RS10330 | Not Available | Negative | 2297054 - 2297749 | 26510.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
