Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme-binding domain-containing protein | LACAL_RS10195 | Not Available | Positive | 2270338 - 2270811 | 18250.9 |
| glycosyltransferase | LACAL_RS10200 | Not Available | Positive | 2270895 - 2272127 | 47117.2 |
| ktsc domain-containing protein | LACAL_RS10205 | Not Available | Negative | 2272195 - 2272641 | 17523.0 |
| abc-f family atp-binding cassette domain-containing protein | LACAL_RS10210 | Not Available | Positive | 2272808 - 2274442 | 61860.1 |
| duf4421 family protein | LACAL_RS10215 | Not Available | Negative | 2274443 - 2275378 | 36029.6 |
| sir2 family nad-dependent protein deacylase | LACAL_RS10220 | Not Available | Negative | 2275395 - 2276078 | 25283.2 |
| chrd domain-containing protein | LACAL_RS10225 | Not Available | Positive | 2276155 - 2277363 | 42852.5 |
| trmh family rna methyltransferase | LACAL_RS10230 | Not Available | Positive | 2277425 - 2278087 | 25763.7 |
| srpbcc family protein | LACAL_RS10235 | Not Available | Positive | 2278108 - 2278632 | 20016.4 |
| carboxypeptidase-like regulatory domain-containing protein | LACAL_RS10240 | Not Available | Negative | 2278710 - 2279522 | 30516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
