Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | LACAL_RS10145 | Not Available | Positive | 2262392 - 2263435 | 37133.8 |
| diphthine--ammonia ligase | LACAL_RS10150 | Not Available | Negative | 2263508 - 2264206 | 26532.6 |
| s41 family peptidase | LACAL_RS10155 | Not Available | Negative | 2264196 - 2265614 | 52245.5 |
| rna polymerase sigma factor | LACAL_RS10160 | Not Available | Positive | 2265821 - 2266330 | 19973.3 |
| hypothetical protein | LACAL_RS10165 | Not Available | Positive | 2266320 - 2266805 | 18533.2 |
| duf4252 domain-containing protein | LACAL_RS10170 | Not Available | Positive | 2266849 - 2267406 | 20713.3 |
| duf4252 domain-containing protein | LACAL_RS10175 | Not Available | Positive | 2267421 - 2267966 | 20883.9 |
| hypothetical protein | LACAL_RS10180 | Not Available | Negative | 2268103 - 2268309 | 7498.47 |
| adenylosuccinate lyase | LACAL_RS10185 | Not Available | Negative | 2268311 - 2269654 | 50470.2 |
| hypothetical protein | LACAL_RS10190 | Not Available | Negative | 2269738 - 2270298 | 21821.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
