Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | LACAL_RS10095 | Not Available | Positive | 2250832 - 2250993 | 6331.87 |
| carbamoyl-phosphate synthase large subunit | LACAL_RS10100 | Not Available | Positive | 2251095 - 2253947 | 106276.0 |
| t9ss type a sorting domain-containing protein | LACAL_RS15045 | Not Available | Positive | 2254073 - 2254696 | 22489.5 |
| acyl-coa thioesterase | LACAL_RS10110 | Not Available | Negative | 2254747 - 2255301 | 20677.7 |
| hypothetical protein | LACAL_RS10115 | Not Available | Negative | 2255306 - 2255662 | 13733.6 |
| dna recombination protein rmuc | LACAL_RS10120 | Not Available | Negative | 2255699 - 2257084 | 53204.4 |
| abc transporter atp-binding protein | LACAL_RS10125 | Not Available | Negative | 2257157 - 2257951 | 29375.9 |
| feccd family abc transporter permease | LACAL_RS10130 | Not Available | Negative | 2258041 - 2259057 | 36270.8 |
| abc transporter substrate-binding protein | LACAL_RS10135 | Not Available | Negative | 2259058 - 2260212 | 43465.7 |
| tonb-dependent receptor plug domain-containing protein | LACAL_RS10140 | Not Available | Positive | 2260534 - 2262384 | 70022.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
