Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sco family protein | LACAL_RS09995 | Not Available | Positive | 2231567 - 2232262 | 26529.8 |
| sialidase family protein | LACAL_RS10000 | Not Available | Positive | 2232340 - 2233440 | 40357.9 |
| hypothetical protein | LACAL_RS10005 | Not Available | Negative | 2233472 - 2233918 | 17527.4 |
| hypothetical protein | LACAL_RS10010 | Not Available | Negative | 2233937 - 2234407 | 17616.5 |
| rna polymerase sigma factor | LACAL_RS10015 | Not Available | Negative | 2234441 - 2234983 | 20891.1 |
| abc transporter atp-binding protein | LACAL_RS10020 | Not Available | Negative | 2235265 - 2237094 | 67834.9 |
| phospho-sugar mutase | LACAL_RS10025 | Not Available | Negative | 2237098 - 2238825 | 64116.8 |
| glycosyltransferase family 2 protein | LACAL_RS10030 | Not Available | Negative | 2238889 - 2239833 | 36029.8 |
| duf4199 domain-containing protein | LACAL_RS10035 | Not Available | Negative | 2239870 - 2240400 | 19331.2 |
| type b 50s ribosomal protein l31 | LACAL_RS10040 | Not Available | Positive | 2240561 - 2240812 | 9579.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
