Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | LACAL_RS09945 | Not Available | Negative | 2223262 - 2225061 | 65205.3 |
| rsmb/nop family class i sam-dependent rna methyltransferase | LACAL_RS09950 | Not Available | Negative | 2225075 - 2226295 | 46712.2 |
| rna polymerase sigma factor | LACAL_RS09955 | Not Available | Positive | 2226508 - 2227086 | 22442.9 |
| hypothetical protein | LACAL_RS09960 | Not Available | Positive | 2227138 - 2227446 | 11712.8 |
| spy/cpxp family protein refolding chaperone | LACAL_RS09965 | Not Available | Positive | 2227450 - 2227917 | 18125.0 |
| ef-hand domain-containing protein | LACAL_RS09970 | Not Available | Positive | 2228058 - 2228342 | 10634.6 |
| calcium-binding domain-containing protein | LACAL_RS09975 | Not Available | Positive | 2228479 - 2229006 | 19602.8 |
| yhyh protein | LACAL_RS09980 | Not Available | Positive | 2229010 - 2230140 | 41613.2 |
| yhyh protein | LACAL_RS09985 | Not Available | Positive | 2230209 - 2230967 | 26981.8 |
| toxin-antitoxin system ywqk family antitoxin | LACAL_RS09990 | Not Available | Positive | 2230972 - 2231592 | 23916.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
