Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | LACAL_RS09895 | Not Available | Negative | 2207769 - 2208347 | 22772.4 |
| m28 family peptidase | LACAL_RS09900 | Not Available | Negative | 2208360 - 2209688 | 49645.9 |
| duf421 domain-containing protein | LACAL_RS09905 | Not Available | Negative | 2209753 - 2210280 | 19394.1 |
| acyl-coa dehydrogenase family protein | LACAL_RS09910 | Not Available | Negative | 2210439 - 2212247 | 66476.6 |
| acetyl-coa c-acyltransferase | LACAL_RS09915 | Not Available | Negative | 2212276 - 2213469 | 42522.5 |
| 3-hydroxyacyl-coa dehydrogenase/enoyl-coa hydratase family protein | LACAL_RS09920 | Not Available | Negative | 2213476 - 2215884 | 88646.1 |
| marr family winged helix-turn-helix transcriptional regulator | LACAL_RS09925 | Not Available | Negative | 2215889 - 2216338 | 17152.7 |
| amp-dependent synthetase/ligase | LACAL_RS09930 | Not Available | Negative | 2216457 - 2218232 | 67443.4 |
| helix-turn-helix domain-containing protein | LACAL_RS15040 | Not Available | Negative | 2218498 - 2219298 | 31118.8 |
| phosphoribosylformylglycinamidine synthase | LACAL_RS09940 | Not Available | Negative | 2219438 - 2223094 | 134285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
