Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | LACAL_RS15575 | Not Available | Positive | 2193241 - 2194485 | 43456.9 |
| tetratricopeptide repeat protein | LACAL_RS09850 | Not Available | Positive | 2194575 - 2195855 | 49021.1 |
| tonb-dependent receptor | LACAL_RS09855 | Not Available | Positive | 2195864 - 2198113 | 84985.5 |
| anti-sigma factor domain-containing protein | LACAL_RS09860 | Not Available | Negative | 2198462 - 2199262 | 29362.9 |
| rna polymerase sigma factor | LACAL_RS09865 | Not Available | Negative | 2199265 - 2199795 | 20377.5 |
| superoxide dismutase family protein | LACAL_RS09870 | Not Available | Negative | 2199805 - 2200362 | 19572.9 |
| vps10 domain-containing protein | LACAL_RS09875 | Not Available | Negative | 2200477 - 2203677 | 120245.0 |
| vwa domain-containing protein | LACAL_RS09880 | Not Available | Positive | 2203776 - 2204903 | 42800.3 |
| sigma 54-interacting transcriptional regulator | LACAL_RS09885 | Not Available | Positive | 2204976 - 2206442 | 55651.9 |
| bifunctional alpha/beta hydrolase/osmc family protein | LACAL_RS09890 | Not Available | Negative | 2206501 - 2207712 | 44335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
