Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydei/ompd-associated family protein | LACAL_RS09740 | Not Available | Negative | 2176974 - 2177576 | 23130.1 |
| duf2200 domain-containing protein | LACAL_RS09745 | Not Available | Negative | 2177591 - 2177956 | 14014.0 |
| m3 family metallopeptidase | LACAL_RS09750 | Not Available | Negative | 2177972 - 2180116 | 81512.1 |
| peptidylprolyl isomerase | LACAL_RS09755 | Not Available | Negative | 2180185 - 2180898 | 27557.2 |
| nudix hydrolase | LACAL_RS09760 | Not Available | Positive | 2180901 - 2181542 | 24086.2 |
| lysophospholipid acyltransferase family protein | LACAL_RS09765 | Not Available | Positive | 2181587 - 2182393 | 31251.9 |
| hypothetical protein | LACAL_RS15035 | Not Available | Negative | 2182397 - 2182852 | 17193.2 |
| hypothetical protein | LACAL_RS09775 | Not Available | Negative | 2182852 - 2183487 | 24705.9 |
| rna polymerase sigma factor | LACAL_RS09780 | Not Available | Negative | 2183492 - 2183986 | 19658.6 |
| tonb-dependent receptor | LACAL_RS09785 | Not Available | Positive | 2184272 - 2186425 | 80713.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
