Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gin domain-containing protein | LACAL_RS09590 | Not Available | Negative | 2150877 - 2151707 | 30644.6 |
| pspc domain-containing protein | LACAL_RS09595 | Not Available | Negative | 2151939 - 2153795 | 70141.3 |
| padr family transcriptional regulator | LACAL_RS09600 | Not Available | Negative | 2153788 - 2154132 | 12873.5 |
| duf4870 domain-containing protein | LACAL_RS09605 | Not Available | Negative | 2154212 - 2154658 | 16852.7 |
| duf4442 domain-containing protein | LACAL_RS09610 | Not Available | Positive | 2154803 - 2155258 | 16755.4 |
| tigr00266 family protein | LACAL_RS09615 | Not Available | Positive | 2155321 - 2156118 | 28431.3 |
| hypothetical protein | LACAL_RS09620 | Not Available | Positive | 2156262 - 2156459 | 7666.43 |
| hypothetical protein | LACAL_RS15315 | Not Available | Positive | 2156543 - 2156929 | 14724.7 |
| mbnp family protein | LACAL_RS09630 | Not Available | Positive | 2156999 - 2157802 | 29341.9 |
| cytochrome-c peroxidase | LACAL_RS09635 | Not Available | Positive | 2157862 - 2158908 | 39102.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
