Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| wbqc family protein | LACAL_RS09445 | Not Available | Negative | 2122836 - 2123453 | 24149.9 |
| signal peptidase i | LACAL_RS09450 | Not Available | Negative | 2123484 - 2125220 | 66583.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | LACAL_RS09455 | Not Available | Negative | 2125281 - 2125985 | 25539.5 |
| duf5683 domain-containing protein | LACAL_RS09460 | Not Available | Negative | 2126090 - 2126689 | 22700.1 |
| parb/repb/spo0j family partition protein | LACAL_RS09465 | Not Available | Negative | 2126679 - 2127587 | 34227.4 |
| para family protein | LACAL_RS09470 | Not Available | Negative | 2127590 - 2128354 | 27661.3 |
| m16 family metallopeptidase | LACAL_RS09475 | Not Available | Negative | 2128511 - 2131360 | 108083.0 |
| coth kinase family protein | LACAL_RS09480 | Not Available | Positive | 2131571 - 2133022 | 56953.9 |
| metallophosphoesterase | LACAL_RS09485 | Not Available | Negative | 2133023 - 2134228 | 46592.9 |
| hypothetical protein | LACAL_RS09490 | Not Available | Negative | 2134277 - 2134915 | 25729.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
