Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | LACAL_RS09395 | Not Available | Negative | 2114766 - 2115845 | 41400.4 |
| tetratricopeptide repeat protein | LACAL_RS09400 | Not Available | Positive | 2115971 - 2116747 | 28431.5 |
| 6,7-dimethyl-8-ribityllumazine synthase | LACAL_RS09405 | Not Available | Positive | 2116775 - 2117257 | 17676.9 |
| hypothetical protein | LACAL_RS09410 | Not Available | Positive | 2117462 - 2117659 | 7655.61 |
| hypothetical protein | LACAL_RS09415 | Not Available | Positive | 2117665 - 2117940 | 10815.1 |
| dna mismatch repair endonuclease mutl | LACAL_RS09420 | Not Available | Positive | 2117947 - 2119809 | 69141.0 |
| rhomboid family intramembrane serine protease | LACAL_RS09425 | Not Available | Positive | 2119836 - 2120624 | 29576.6 |
| rhomboid family protein | LACAL_RS09430 | Not Available | Positive | 2120624 - 2121484 | 32258.8 |
| endonuclease/exonuclease/phosphatase family protein | LACAL_RS09435 | Not Available | Positive | 2121487 - 2122506 | 39618.3 |
| duf6122 family protein | LACAL_RS09440 | Not Available | Negative | 2122522 - 2122836 | 12172.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
