Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd40 domain-containing protein | LACAL_RS09345 | Not Available | Negative | 2106220 - 2107146 | 35918.0 |
| peptidylprolyl isomerase | LACAL_RS09350 | Not Available | Negative | 2107319 - 2108518 | 43429.9 |
| gliding motility-associated peptidyl-prolyl isomerase gldi | LACAL_RS09355 | Not Available | Negative | 2108558 - 2109100 | 20213.0 |
| dhh family phosphoesterase | LACAL_RS09360 | Not Available | Negative | 2109093 - 2110112 | 37920.2 |
| nucleoside-diphosphate kinase | LACAL_RS09365 | Not Available | Positive | 2110200 - 2110619 | 15173.0 |
| m4 family metallopeptidase | LACAL_RS09370 | Not Available | Positive | 2110722 - 2113295 | 93443.4 |
| cold-shock protein | LACAL_RS09375 | Not Available | Negative | 2113372 - 2113563 | 7015.27 |
| cold-shock protein | LACAL_RS09380 | Not Available | Negative | 2113736 - 2113927 | 6961.16 |
| duf721 domain-containing protein | LACAL_RS09385 | Not Available | Negative | 2114031 - 2114327 | 11167.6 |
| hypothetical protein | LACAL_RS09390 | Not Available | Negative | 2114347 - 2114763 | 16251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
