Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m15 family metallopeptidase | LACAL_RS09295 | Not Available | Positive | 2090730 - 2091395 | 25648.5 |
| trmh family rna methyltransferase | LACAL_RS09300 | Not Available | Negative | 2091414 - 2092214 | 29447.6 |
| t9ss type a sorting domain-containing protein | LACAL_RS09305 | Not Available | Positive | 2092432 - 2096805 | 159086.0 |
| duf6503 family protein | LACAL_RS09310 | Not Available | Positive | 2096903 - 2097718 | 30881.6 |
| duf6503 family protein | LACAL_RS09315 | Not Available | Positive | 2097755 - 2098552 | 30464.8 |
| hypothetical protein | LACAL_RS09320 | Not Available | Negative | 2098628 - 2098993 | 13958.6 |
| amidohydrolase family protein | LACAL_RS09325 | Not Available | Negative | 2099047 - 2100345 | 47475.8 |
| amidohydrolase family protein | LACAL_RS09330 | Not Available | Negative | 2100418 - 2103408 | 111094.0 |
| duf3810 domain-containing protein | LACAL_RS09335 | Not Available | Negative | 2103478 - 2104545 | 41266.3 |
| aminoacyl-histidine dipeptidase | LACAL_RS09340 | Not Available | Positive | 2104643 - 2106103 | 53144.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
