Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | LACAL_RS09190 | Not Available | Positive | 2056911 - 2057285 | 12833.3 |
| dna-directed rna polymerase subunit beta | LACAL_RS09195 | Not Available | Positive | 2057410 - 2061222 | 142833.0 |
| dna-directed rna polymerase subunit beta' | LACAL_RS09200 | Not Available | Positive | 2061294 - 2065595 | 159125.0 |
| duf3467 domain-containing protein | LACAL_RS09205 | Not Available | Positive | 2065670 - 2065990 | 11837.2 |
| peptide chain release factor 3 | LACAL_RS09210 | Not Available | Negative | 2066212 - 2067801 | 60431.4 |
| ig-like domain-containing protein | LACAL_RS09215 | Not Available | Positive | 2068384 - 2074653 | 215752.0 |
| beta strand repeat-containing protein | LACAL_RS09220 | Not Available | Positive | 2074650 - 2076521 | 63451.2 |
| ig-like domain-containing protein | LACAL_RS09230 | Not Available | Positive | 2076541 - 2077812 | 43094.9 |
| ig-like domain-containing protein | LACAL_RS09235 | Not Available | Positive | 2077851 - 2081231 | 116230.0 |
| type ix secretion system membrane protein porp/sprf | LACAL_RS09240 | Not Available | Positive | 2081289 - 2082218 | 34462.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
