Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tmrna,resume consensus sequence (at 89): tttaaacggcgagaataa | Not Available | Not Available | Positive | 1999469 - 1999863 | Not Available |
| duf2945 domain-containing protein | LACAL_RS08895 | Not Available | Positive | 2000169 - 2000381 | 7845.29 |
| nad(p)-dependent oxidoreductase | LACAL_RS08900 | Not Available | Positive | 2000442 - 2001650 | 45327.4 |
| sdr family nad(p)-dependent oxidoreductase | LACAL_RS08905 | Not Available | Positive | 2001637 - 2002476 | 30656.2 |
| carboxypeptidase-like regulatory domain-containing protein | LACAL_RS08910 | Not Available | Positive | 2002552 - 2004753 | 78562.8 |
| hypothetical protein | LACAL_RS08915 | Not Available | Positive | 2004837 - 2005196 | 12625.3 |
| hypothetical protein | LACAL_RS08920 | Not Available | Positive | 2005256 - 2005510 | 9870.69 |
| duf1801 domain-containing protein | LACAL_RS08925 | Not Available | Positive | 2005507 - 2005875 | 14395.4 |
| hypothetical protein | LACAL_RS08930 | Not Available | Negative | 2005872 - 2006732 | 32971.9 |
| 3-deoxy-8-phosphooctulonate synthase | LACAL_RS08935 | Not Available | Negative | 2006754 - 2007572 | 29923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
