Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase domain-containing protein | LACAL_RS00870 | Not Available | Positive | 178622 - 179704 | 40367.8 |
| fibronectin type iii domain-containing protein | LACAL_RS00875 | Not Available | Positive | 179869 - 180855 | 35901.4 |
| signal recognition particle-docking protein ftsy | LACAL_RS00880 | Not Available | Negative | 180940 - 181914 | 35243.3 |
| duf4295 domain-containing protein | LACAL_RS15145 | Not Available | Negative | 182086 - 182238 | 5589.01 |
| 50s ribosomal protein l33 | LACAL_RS00885 | Not Available | Negative | 182260 - 182442 | 6925.62 |
| 50s ribosomal protein l28 | LACAL_RS00890 | Not Available | Negative | 182501 - 182737 | 8721.93 |
| cina family nicotinamide mononucleotide deamidase-related protein | LACAL_RS00895 | Not Available | Negative | 182817 - 184064 | 45361.0 |
| hypothetical protein | LACAL_RS00900 | Not Available | Negative | 184065 - 184406 | 13003.5 |
| fumarylacetoacetate hydrolase family protein | LACAL_RS00905 | Not Available | Negative | 184409 - 185020 | 23179.1 |
| 3'-5' exonuclease | LACAL_RS00910 | Not Available | Negative | 185029 - 185802 | 29383.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
