Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | LACAL_RS08800 | Not Available | Positive | 1981123 - 1984203 | 112993.0 |
| ragb/susd family nutrient uptake outer membrane protein | LACAL_RS08805 | Not Available | Positive | 1984231 - 1985652 | 52443.1 |
| pkd domain-containing protein | LACAL_RS15595 | Not Available | Positive | 1985669 - 1986535 | 30797.0 |
| polysaccharide lyase family 7 protein | LACAL_RS08815 | Not Available | Positive | 1986560 - 1987477 | 35292.6 |
| fadr/gntr family transcriptional regulator | LACAL_RS08820 | Not Available | Positive | 1987612 - 1988313 | 26476.4 |
| mfs transporter | LACAL_RS08825 | Not Available | Positive | 1988343 - 1989644 | 47103.2 |
| sdr family nad(p)-dependent oxidoreductase | LACAL_RS08830 | Not Available | Positive | 1989717 - 1990481 | 26696.6 |
| sugar kinase | LACAL_RS08835 | Not Available | Positive | 1990608 - 1991630 | 37545.9 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | LACAL_RS08840 | Not Available | Positive | 1991640 - 1992308 | 24051.2 |
| laci family dna-binding transcriptional regulator | LACAL_RS08845 | Not Available | Positive | 1992316 - 1992825 | 19376.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
