Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytidine(34)-2'-o)-methyltransferase | LACAL_RS08705 | Not Available | Negative | 1962528 - 1962986 | 17410.1 |
| hypothetical protein | LACAL_RS15435 | Not Available | Negative | 1963057 - 1963200 | 5343.24 |
| duf805 domain-containing protein | LACAL_RS08710 | Not Available | Negative | 1963296 - 1963712 | 15560.1 |
| tryptophan synthase subunit alpha | LACAL_RS08715 | Not Available | Negative | 1963756 - 1964520 | 28195.2 |
| tryptophan synthase subunit beta | LACAL_RS08720 | Not Available | Negative | 1964630 - 1965811 | 43156.8 |
| phosphoribosylanthranilate isomerase | LACAL_RS08725 | Not Available | Negative | 1965815 - 1966450 | 24195.4 |
| indole-3-glycerol phosphate synthase trpc | LACAL_RS08730 | Not Available | Negative | 1966455 - 1967240 | 29155.5 |
| anthranilate phosphoribosyltransferase | LACAL_RS08735 | Not Available | Negative | 1967277 - 1968272 | 36067.5 |
| anthranilate synthase component ii | LACAL_RS08740 | Not Available | Negative | 1968304 - 1968867 | 20855.1 |
| anthranilate synthase component i family protein | LACAL_RS08745 | Not Available | Negative | 1968943 - 1970337 | 52725.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
