Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein thx | LACAL_RS15185 | Not Available | Negative | 1956167 - 1956298 | 4949.29 |
| hypothetical protein | LACAL_RS08660 | Not Available | Positive | 1956378 - 1957100 | 28254.0 |
| uracil-dna glycosylase family protein | LACAL_RS08665 | Not Available | Positive | 1957128 - 1957805 | 26047.8 |
| serine hydrolase domain-containing protein | LACAL_RS08670 | Not Available | Negative | 1957821 - 1958846 | 38890.9 |
| dead/deah box helicase | LACAL_RS08675 | Not Available | Positive | 1959063 - 1960397 | 48682.1 |
| duf6500 family protein | LACAL_RS08680 | Not Available | Positive | 1960444 - 1960653 | 8100.89 |
| vf530 family dna-binding protein | LACAL_RS08685 | Not Available | Positive | 1960655 - 1960876 | 8732.45 |
| hypothetical protein | LACAL_RS08690 | Not Available | Negative | 1961033 - 1961290 | 10080.3 |
| c-type cytochrome | LACAL_RS08695 | Not Available | Negative | 1961298 - 1961612 | 11656.8 |
| dna alkylation repair protein | LACAL_RS08700 | Not Available | Negative | 1961921 - 1962517 | 24008.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
