Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | LACAL_RS08610 | Not Available | Positive | 1944981 - 1945562 | 22360.3 |
| t9ss type a sorting domain-containing protein | LACAL_RS08615 | Not Available | Positive | 1945793 - 1947667 | 68165.7 |
| m14 family metallopeptidase | LACAL_RS08620 | Not Available | Negative | 1947720 - 1949450 | 66894.3 |
| sulp family inorganic anion transporter | LACAL_RS08625 | Not Available | Positive | 1949549 - 1951210 | 60139.1 |
| pantetheine-phosphate adenylyltransferase | LACAL_RS08630 | Not Available | Negative | 1951242 - 1951697 | 17254.1 |
| zinc-ribbon domain-containing protein | LACAL_RS08635 | Not Available | Negative | 1951737 - 1952342 | 23316.7 |
| d-alanine--d-alanine ligase | LACAL_RS08640 | Not Available | Negative | 1952386 - 1953363 | 36508.5 |
| pasta domain-containing protein | LACAL_RS08645 | Not Available | Positive | 1953543 - 1954097 | 20597.2 |
| rlua family pseudouridine synthase | LACAL_RS08650 | Not Available | Positive | 1954100 - 1955137 | 39307.9 |
| peroxide stress protein yaaa | LACAL_RS08655 | Not Available | Positive | 1955408 - 1956166 | 28799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
