Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four helix bundle protein | LACAL_RS08115 | Not Available | Positive | 1834558 - 1834941 | 14716.5 |
| paai family thioesterase | LACAL_RS08120 | Not Available | Positive | 1834955 - 1835368 | 15173.2 |
| 3-oxoadipyl-coa thiolase | LACAL_RS08125 | Not Available | Positive | 1835629 - 1836843 | 43287.9 |
| phenylacetic acid degradation bifunctional protein paaz | LACAL_RS08130 | Not Available | Positive | 1837192 - 1839729 | 94632.0 |
| giy-yig nuclease family protein | LACAL_RS08135 | Not Available | Positive | 1839821 - 1840108 | 11722.2 |
| enoyl-coa hydratase/isomerase family protein | LACAL_RS08140 | Not Available | Positive | 1840154 - 1840906 | 27238.8 |
| hypothetical protein | LACAL_RS08145 | Not Available | Negative | 1840915 - 1841205 | 11099.6 |
| transferase hexapeptide repeat family protein | LACAL_RS08150 | Not Available | Positive | 1841310 - 1841906 | 21557.1 |
| arac family transcriptional regulator | LACAL_RS08155 | Not Available | Negative | 1841908 - 1842807 | 34761.3 |
| aldehyde dehydrogenase family protein | LACAL_RS08160 | Not Available | Positive | 1843004 - 1844419 | 50693.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
