Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | LACAL_RS08015 | Not Available | Positive | 1813948 - 1816731 | 104968.0 |
| tpm domain-containing protein | LACAL_RS08020 | Not Available | Negative | 1816728 - 1817201 | 17837.6 |
| tpm domain-containing protein | LACAL_RS08025 | Not Available | Negative | 1817241 - 1818032 | 28087.1 |
| tpm domain-containing protein | LACAL_RS08030 | Not Available | Negative | 1818104 - 1818544 | 16267.3 |
| lema family protein | LACAL_RS08035 | Not Available | Negative | 1818552 - 1819151 | 22624.7 |
| merr family transcriptional regulator | LACAL_RS08040 | Not Available | Negative | 1819189 - 1819518 | 12826.8 |
| m23 family metallopeptidase | LACAL_RS08045 | Not Available | Negative | 1819518 - 1820489 | 36959.1 |
| alanine--trna ligase | LACAL_RS08050 | Not Available | Positive | 1820709 - 1823324 | 98856.4 |
| gscfa domain-containing protein | LACAL_RS08055 | Not Available | Positive | 1823356 - 1824300 | 36619.4 |
| duf4230 domain-containing protein | LACAL_RS08060 | Not Available | Positive | 1824794 - 1825408 | 23378.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
