Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-f family atp-binding cassette domain-containing protein | LACAL_RS07765 | Not Available | Positive | 1756755 - 1758662 | 72694.9 |
| efflux rnd transporter periplasmic adaptor subunit | LACAL_RS07770 | Not Available | Positive | 1758742 - 1759878 | 42080.0 |
| efflux rnd transporter permease subunit | LACAL_RS07775 | Not Available | Positive | 1759878 - 1763075 | 117628.0 |
| tolc family protein | LACAL_RS07780 | Not Available | Positive | 1763065 - 1764384 | 49564.5 |
| hypothetical protein | LACAL_RS07785 | Not Available | Positive | 1764542 - 1765360 | 30100.2 |
| cpxcg motif-containing cysteine-rich protein | LACAL_RS07790 | Not Available | Positive | 1765437 - 1765619 | 7164.48 |
| Trna-met | Not Available | Not Available | Positive | 1765739 - 1765811 | Not Available |
| tyrosine-type recombinase/integrase | LACAL_RS07800 | Not Available | Positive | 1765865 - 1767220 | 52905.9 |
| hypothetical protein | LACAL_RS07805 | Not Available | Positive | 1767221 - 1768189 | 38699.5 |
| hypothetical protein | LACAL_RS07810 | Not Available | Positive | 1768389 - 1768619 | 9062.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
