Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 interaction domain-containing protein | LACAL_RS07715 | Not Available | Negative | 1743680 - 1744942 | 47523.6 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | LACAL_RS07720 | Not Available | Negative | 1744984 - 1746423 | 54298.0 |
| type i dna topoisomerase | LACAL_RS07725 | Not Available | Positive | 1746679 - 1749207 | 95096.5 |
| formimidoylglutamase | LACAL_RS07730 | Not Available | Positive | 1749214 - 1750380 | 44086.4 |
| gliding motility lipoprotein gldk | LACAL_RS07735 | Not Available | Positive | 1750546 - 1751919 | 52368.9 |
| gliding motility protein gldl | LACAL_RS07740 | Not Available | Positive | 1751976 - 1752611 | 22704.5 |
| gliding motility protein gldm | LACAL_RS07745 | Not Available | Positive | 1752659 - 1754224 | 56668.2 |
| gliding motility protein gldn | LACAL_RS07750 | Not Available | Positive | 1754262 - 1755161 | 34612.7 |
| nad(p)/fad-dependent oxidoreductase | LACAL_RS07755 | Not Available | Positive | 1755239 - 1756279 | 39540.8 |
| duf983 domain-containing protein | LACAL_RS07760 | Not Available | Negative | 1756263 - 1756667 | 15345.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
