Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate--l-alanine ligase | LACAL_RS07615 | Not Available | Positive | 1724390 - 1725745 | 50734.0 |
| hypothetical protein | LACAL_RS07620 | Not Available | Positive | 1725878 - 1726528 | 24524.2 |
| rod shape-determining protein roda | LACAL_RS07625 | Not Available | Negative | 1726578 - 1727852 | 48114.1 |
| penicillin-binding protein 2 | LACAL_RS07630 | Not Available | Negative | 1727860 - 1729782 | 72907.7 |
| rod shape-determining protein mred | LACAL_RS07635 | Not Available | Negative | 1729779 - 1730288 | 19490.7 |
| rod shape-determining protein mrec | LACAL_RS07640 | Not Available | Negative | 1730281 - 1731102 | 30579.6 |
| rod shape-determining protein | LACAL_RS07645 | Not Available | Negative | 1731114 - 1732142 | 37324.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | LACAL_RS07650 | Not Available | Negative | 1732504 - 1734036 | 55692.0 |
| gaf domain-containing protein | LACAL_RS07655 | Not Available | Negative | 1734140 - 1734595 | 16953.1 |
| exosortase family protein xrtf | LACAL_RS07660 | Not Available | Positive | 1734678 - 1735229 | 21035.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
